Kinship can be difficult to discern in the archaeological record, but the study of ancient DNA offers a useful window into one form of kinship: biological relatedness. Here, the authors explore possible kin connections at the post-Roman site of Worth Matravers in south-west England. They find that, while clusters of genetically related individuals are apparent, the inclusion of unrelated individuals in double or triple burials demonstrates an element of social kinship in burial location. Some individuals also carried genetic signatures of continental ancestry, with one young male revealing recent West African ancestry, highlighting the diverse heritage of early medieval Britain.

Distinguishing early domesticates from their wild progenitors presents a significant obstacle for understanding human-mediated effects in the past. The origin of dogs is particularly controversial because potential early dog remains often lack corroborating evidence that can provide secure links between proposed dog remains and human activity. The Tumat Puppies, two permafrost-preserved Late Pleistocene canids, have been hypothesized to have been littermates and early domesticates due to a physical association with putatively butchered mammoth bones. Through a combination of osteometry, stable isotope analysis, plant macrofossil analysis, and genomic and metagenomic analyses, this study exploits the unique properties of the naturally mummified Tumat Puppies to examine their familial relationship and to determine whether dietary information links them to human activities. The multifaceted analysis reveals that the 14,965–14,046 cal yr BP Tumat Puppies were littermates who inhabited a dry and relatively mild environment with heterogeneous vegetation and consumed a diverse diet, including woolly rhinoceros in their final days. However, because there is no evidence of mammoth consumption, these data do not establish a link between the canids and ancient humans.

Recent genomic analysis of a skull fragment from Newgrange, Ireland, revealed a rare case of incest. Together with a wider network of distantly related passage tomb interments, this has bolstered claims of a social elite in later Neolithic Ireland. Here, the authors evaluate this social evolutionary interpretation, drawing on insecurities in context and the relative rarity of engendered status or resource restrictions in the archaeological record of prehistoric Ireland to argue that the status of individuals during this period is better understood through unstable identity negotiations. Inclusion in a passage tomb, while ‘special’, need not equate to a perpetual elite.

In this paper, we examine cases where radiocarbon (14C) dates are incompatible with dates produced by other established archaeological methods. We present results from nine bones that we sampled from tombs in Phoenician sites in Sicily. These bones produced radiocarbon dates conflicting with established dates of finds in the associated tombs. These discrepancies, particularly in tomb dates, pose a serious problem, as they suggest that the finds may be disconnected from the buried individuals, challenging the fundamental premise of studying excavated tombs. To put our findings in a broader context, we also present other cases of discrepancies found in recent publications and note some common observations throughout these studies. Our questions and observations arise from the significant implications that radiocarbon dating has for our research on Phoenician ancient DNA, as these conflicts impact our understanding of the potential migration and movement of Phoenician people throughout the Mediterranean.

This study explores directional selection on physical and psychosocial phenotypes in Eastern Eurasian populations, utilizing a dataset of 1245 ancient genomes. By analyzing polygenic scores (PGS) for traits including height, educational attainment (EA), IQ, autism, schizophrenia, and others, we observed significant temporal trends spanning the Holocene era. The results suggest positive selection for cognitive-related traits such as IQ, EA and autism spectrum disorder (ASD), alongside negative selection for anxiety and depression. The results for height were mixed and showed nonlinear relationships with Years Before Present (BP). These trends were partially mediated by genetic components linked to distinct ancestral populations. Regression models incorporating admixture, geography, and temporal variables were used to account for biases in population composition over time. Latitude showed a positive effect on ASD PGS, EA and height, while it had a negative effect on skin pigmentation scores. Additionally, latitude exhibited significant nonlinear effects on multiple phenotypes. The observed patterns highlight the influence of climate-mediated selection pressures on trait evolution. Spline regression revealed that several polygenic scores had nonlinear relationships with years BP. The findings provide evidence for complex evolutionary dynamics, with distinct selective pressures shaping phenotypic diversity across different timescales and environments.

Post-mortem manipulation of human bodies, including the commingling of multiple individuals, is attested throughout the past. More rarely, the bones of different individuals are assembled to create a single ‘individual’ for burial. Rarer still are composite individuals with skeletal elements separated by hundreds or even thousands of years. Here, the authors report an isolated inhumation within a Gallo-Roman-period cremation cemetery at Pommerœul, Belgium. Assumed to be Roman, radiocarbon determinations show the burial is Late Neolithic—with a Roman-period cranium. Bioarchaeological analyses also reveal the inclusion of multiple Neolithic individuals of various ages and dates. The burial is explained as a composite Neolithic burial that was reworked 2500 years later with the addition of a new cranium and grave goods.

The analysis of coprolites provides direct evidence of resources consumed and may be paired with ethnographic data to elucidate the dietary and medicinal use of plants in archaeological communities. This article combines and contrasts the macroscopic analysis and DNA metabarcoding of 10 coprolites from Bonneville Estates Rockshelter, Nevada, USA. While the results from both methods confirm previous understandings of subsistence practices at the site, minimal overlap in identified taxa suggests that each accesses different components of the consumed material. The two methods should therefore be seen as complementary and employed together, where possible.

Paquimé (also known as Casas Grandes), situated in northern Chihuahua between Mesoamerican and Ancestral Puebloan groups, was a vibrant multicultural centre during the thirteenth and fourteenth centuries AD. Substantial debate surrounds the social organisation of Paquimé's inhabitants. Here, the authors report on the analysis of ancient DNA from a unique child burial beneath a central support post of a room in the House of the Well. They argue that the close genetic relationship of the child's parents, revealed through this analysis, and the special depositional context of the burial reflect one family's attempts to consolidate and legitimise their social standing in this ancient community.

After St James the Apostle, Bishop Teodomiro of Iria-Flavia is the most important figure associated with the pilgrimage to Santiago de Compostela. He supposedly discovered the apostolic tomb after a divine revelation between AD 820 and 830 yet, until the discovery, in 1955, of a tombstone inscribed with his name, his very existence was a matter of some debate. Here, the authors employ a multi-stranded analytical approach, combining osteoarchaeology, radiocarbon dating, stable isotope and ancient DNA analyses to demonstrate that human bones associated with the tombstone, in all likelihood, represent the earthly remains of Bishop Teodomiro.

Multiple studies have demonstrated that European colonization of the Americas led to the death of nearly all North American dog mitochondrial lineages and replacement with European ones sometime between AD 1492 and the present day. Historical records indicate that colonists imported dogs from Europe to North America, where they became objects of interest and exchange as early as the seventeenth century. However, it is not clear whether the earliest archaeological dogs recovered from colonial contexts were of European, Indigenous, or mixed descent. To clarify the ancestry of dogs from the Jamestown Colony, Virginia, we sequenced ancient mitochondrial DNA from six archaeological dogs from the period 1609–1617. Our analysis shows that the Jamestown dogs have maternal lineages most closely associated with those of ancient Indigenous dogs of North America. Furthermore, these maternal lineages cluster with dogs from Late Woodland, Hopewell, and Virginia Algonquian archaeological sites. Our recovery of Indigenous dog lineages from a European colonial site suggests a complex social history of dogs at the interface of Indigenous and European populations during the early colonial period.

This article discusses ethical frameworks for planning and implementing composite research in the United States. Composites, defined here as archaeological materials with multiple genetic sources, include materials such as sediment, coprolites, birch pitch, and dental calculus. Although composites are increasingly used in genetic research, the ethical considerations of their use in ancient DNA studies have not been widely discussed. Here, we consider how composites’ compositions, contexts, and potential to act as proxies can affect research plans and offer an overview of the primary ethical concerns of ancient DNA research. It is our view that ethical principles established for analyses of Ancestral remains and related materials can be used to inform research plans when working with composite evidence. This work also provides a guide to archaeologists unfamiliar with genetics analyses in planning research when using composite evidence from the United States with a focus on collaboration, having a clear research plan, and using lab methods that provide the desired data with minimal destruction. Following the principles discussed in this article and others allows for engaging in composite research while creating and maintaining positive relationships with stakeholders.

Grain-cooking traditions in Neolithic China have been characterised as a ‘wet’ cuisine based on the boiling and steaming of sticky varieties of cereal. One of these, broomcorn millet, was one of the earliest Chinese crops to move westward into Central Asia and beyond, into regions where grains were typically prepared by grinding and baking. Here, the authors present the genotypes and reconstructed phenotypes of 13 desiccated broomcorn millet samples from Xinjiang (1700 BC–AD 700). The absence in this area of sticky-starch millet and vessels for boiling and steaming suggests that, as they moved west, East Asian cereal crops were decoupled from traditional cooking practices and were incorporated into local cuisines.

In 2017, ancient DNA analysis of the Harper Road burial from Southwark (London) found that the individual had male chromosomes. Now analysis has discovered that the individual had female chromosomes, data which match the osteological estimation of sex and the interpretation of the grave-goods.

The increasing use of massively parallel sequencing in the study of current and ancient human populations has enabled new approaches to bioanthropological and archaeological issues; however, its application to archaeological samples requires the use of technologies that are not easily accessible outside US and European research centers. To obtain an ancient mitogenome in Argentina, several institutions collaborated to apply massively parallel sequencing and bioinformatic methodologies on an enriched ancient DNA library of an individual from the Beagle Channel (dated 1504 ± 46 years BP), a region of particular interest for this line of inquiry. Phylogenetic reconstruction showed a close relationship with a Yamana from Navarino Island and an individual from Hoste Island (Chilean Antarctic Province): the three shared an ancestor who lived between 203 and 4,439 years ago. These three have mutations reported only for current and ancient individuals from the Beagle Channel, and their relationship with the rest of the D1g sub-haplogroups is unclear. The results obtained here are consistent with the reduction of mobility in the Fuegian archipelago around 4500 years BP that has been proposed based on archaeological evidence.

In this essay, we explore the philosophical and ethical issues concerning de-extinction. First, we will characterize what de-extinction is. This requires clarification of the process of extinction. Second, we consider whether de-extinction is even possible. There are a variety of arguments involving the nature of species that purport to show that once they have disappeared they cannot be resurrected. Third, we examine whether de-extinction is morally permissible. There are arguments that suggest we are obligated to do it based on restorative justice and biodiversity conservation. There are other arguments that conclude we are not permitted to do so based on considerations of animal welfare, hubris and the allocation of conservation resources.

Excavation at Mogou, a Bronze Age cemetery containing over 1700 burials and 6000 individuals, has revealed a diverse range of multiple burials. Building on this dataset, the Mogou Multidisciplinary Investigation Project aims to explore connections between kinship, burial space and social organisation in Bronze Age north-west China.

Campeche, one of the Spanish Empire's main Mexican ports, was a place where previously distinct cultures and populations intermingled during the colonial era (AD 1540–1680). Investigation of the town's central plaza revealed a Hispanic cemetery of multi-ethnic burials. The authors combine previous analyses with newly generated genome-wide data from 10 individuals to trace detailed life histories of the mostly young, local Indigenous Americans and first-generation European and African immigrants, none of whom show evidence of genetic admixture. These results provide insights into the individual lives and social divides of the town's founder communities and demonstrate how ancient DNA analyses can contribute to understanding early colonial encounters.

Human remains from the (late) Middle Paleolithic remain rare. Improving our understanding of their spatio-temporal distribution is essential for obtaining insights into human evolution and the dynamics between Neanderthals and early Anatomically Modern Humans (AMHs). We present the single-amino-acid radiocarbon dating and ancient DNA results from the only Neanderthal skeletal remains known in Slovakia (Šal’a I and Šal’a II). As they were found without archaeological context and in secondary deposition, recontextualization is important. By employing the hydroxyproline radiocarbon dating method, we were able to successfully counteract contamination issues and circumvent problems caused by highly degraded collagen. By contrast, DNA analysis did not detect any endogenous DNA at the limits of our resolution. We conclude that the radiocarbon ages of >44,800 BP (OxA-X-2731-16) and >45,100 (OxA-X-2731-15) firmly place the two individuals in the Middle Paleolithic, and before the arrival of AMHs to the region. Furthermore, indirect evidence based on morphology and possibly related faunal remains suggest ages younger than 100 ka. This time frame coincides with a period in which Neanderthal populations were highly dispersed in Europe, yet in decline.

This study presents the results of ancient DNA analyses of eight snakehead (Channa sp.) bones from the Market Street Chinatown, a nineteenth-century Chinese diaspora archaeological site in San Jose, California. The sequences of a short stretch of the mitochondrial DNA identify the Market Street Chinatown snakeheads as Giant Snakehead (Channa micropeltes), a species native to Southeast Asia. These results provide the first archaeological evidence of the nineteenth-century trade of Asian freshwater fishes to North America, and they reveal that preserved fish products from throughout the Pacific World were readily distributed across the Chinese diaspora. We place our findings within the broader context of nineteenth-century Chinese migration to show how the common Chinese small shareholding business model and access to trade connections facilitated by Chinese-operated import/export firms known as jinshanzhuang allowed Chinese fishers to be successful across the Pacific World. Finally, we suggest avenues for future study by comparing Chinese migration-based, flexible fishing strategies using generalist methods with the highly specialized collection and trade of species like Atlantic Cod (Gadus morhua) in the North Atlantic.